PROJECT NAME
GOLD Project ID
Gp0009205  
Project Name
Streptococcus equi zooepidemicus ST 123  
Other Names
  
Legacy ER Project ID
18382  
Legacy ER ID
18382  
Legacy GOLD ID
Gi08432  
NCBI BioProject Name Streptococcus equi subsp. zooepidemicus ST 123
NCBI BioProject ID 40565
NCBI BioProject Accession
PRJEA40565  
NCBI Locus Tag
SZBHS5  
NCBI Biosample ID
Added By Ioanna Pagani on 2010-11-29
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Animal Pathogen
Cattle Pathogen
Medical
Swine Pathogen
Sequencing Center Univ of Liverpool (United Kingdom)
Collaborating Institute
  
Funding Agency
  
Project Description
Streptococcus equi subsp. zooepidemicus str. ST 123 genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Infection and immunity 78(11):4817-27 "Identification of three novel superantigen-encoding genes in Streptococcus equi subsp. zooepidemicus, szeF, szeN, and szeP."
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Streptococcus equi zooepidemicus ST 123
Biosamples Streptococcus equi zooepidemicus ST 123
Analysis Projects Streptococcus equi zooepidemicus ST 123
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology 454-GS-FLX
Library Method
250bp and 3kb inserts  
Number Of Reads
515689  
Read Size
  
Sequencing Depth
45x  
Vector
  
GC Percent
41  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
Organism Name Streptococcus equi zooepidemicus ST 123
Other names (alias, synonyms, short names, common names)
  
Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Streptococcus  
Genus Synonyms
  
Species
equi zooepidemicus  
Species Synonyms
  
Strain
ST 125, BHS5  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 681573
NCBI Kingdom
Bacteria  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Streptococcaceae  
NCBI Genus
Streptococcus  
NCBI Species
Streptococcus equi  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
Free living  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Pairs
Diseases Opportunistic infection
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources