PROJECT NAME
GOLD Project ID
Gp0008841  
Project Name
Acinetobacter baumannii OIFC035  
Other Names
  
Legacy ER Project ID
17954  
Legacy ER ID
17954  
Legacy GOLD ID
Gi07782  
NCBI BioProject Name Acinetobacter baumannii OIFC035
NCBI BioProject ID 53451
NCBI BioProject Accession
PRJNA53451  
NCBI Locus Tag
ACIN5035  
NCBI Biosample ID SAMN00761235
PI
  
Added By Ioanna Pagani on 2010-10-05
Last Modified By Auto script update processes on 2014-07-23
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Medical
Nosocomial Pathogen
Pathogen
Sequencing Center
  
Collaborating Institute Walter Reed Army Institute of Research (WRAIR) (USA)
Funding Agency
  
Project Description
This bacterium is commonly isolated from the hospital environment and hospitalized patients. It is an aquatic organism, and is often cultured from liquid medical samples such as respiratory secretions, wounds, and urine. Acinetobacter also colonizes irrigating solutions and intravenous solutions. Although it has low virulence, it is capable of causing infection. Most isolates recovered from patients represent colonization rather than infection. When infections do occur, they usually occur in the blood, or in organs with a high fluid content, such as the lungs or urinary tract. Infections by this organism are becoming increasingly problematic due to the high number of resistance genes found in clinical isolates. Some strains are now resistant to all known antibiotics. Most of these genes appear to have been transferred horizontally from other organisms. Many of them cluster into a single genomic island in strain AYE as compared to strain SDF.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Publication
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Genome sequencing of Acinetobacter baumannii Isolates - Walter Reed Army Institute of Research
Biosamples Acinetobacter baumannii OIFC035
Analysis Projects Acinetobacter baumannii OIFC035
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality
  
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology Illumina
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
61.8x  
Vector
  
GC Percent
39  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Acinetobacter baumannii OIFC035
Other names (alias, synonyms, short names, common names)
  
Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Acinetobacter  
Genus Synonyms
  
Species
baumannii  
Species Synonyms
  
Strain
OIFC035  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 903926
NCBI Kingdom
Bacteria  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Pseudomonadales  
NCBI Family
Moraxellaceae  
NCBI Genus
Acinetobacter  
NCBI Species
Acinetobacter baumannii  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
Free living  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Nosocomial infection
Pneumonia
Known Habitats Fresh water
Host
Human skin
Metabolisms
  
Phenotypes Pathogen
Energy Sources Chemoheterotroph
Heterotroph