PROJECT NAME
GOLD Project ID
Gp0000760  
Project Name
Drosophila melanogaster y; cn bw sp  
Other Names
  
Legacy ER Project ID
10657  
Legacy ER ID
10657  
Legacy GOLD ID
Gc00029, Gi0010657  
NCBI BioProject Name Drosophila melanogaster
NCBI BioProject ID 13812
NCBI BioProject Accession
PRJNA13812  
NCBI Locus Tag
  
NCBI Biosample ID
PI Gibbs R
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Tatiparthi B. Reddy on 2012-11-13
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Model Organism
Sequencing Center Celera Genomics (USA)
Univ of California, Berkeley (USA)
Ernest Orlando Lawrence Berkeley National Laboratory, Drosophila Heterochromatin Genome Project, USA, Berkeley (USA)
Harvard University, FlyBase, USA, Cambridge (USA)
Collaborating Institute
  
Funding Agency Celera Genomics (USA)
European Union (European Union)
Project Description
The Drosophila melanogaster genome was assembled from a combination of whole genome shotgun (WGS) and clone-based sequence data, and is annotated by the FlyBase Consortium.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Wikipedia
Database
  
Genome Publications "Science (New York, N.Y.)" The genome sequence of Drosophila melanogaster.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Drosophila melanogaster y; cn bw sp
Biosamples Drosophila melanogaster y; cn bw sp
Analysis Projects
  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality Level 2: High-Quality Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology Sanger
Library Method
1.8,2, 3, 9.8, 10.5, 11.5kb inserts  
Number Of Reads
  
Read Size
  
Sequencing Depth
12x  
Vector
BstX1-linearized plasmid vector, pUC18, pBR322, M13, BstX1-linearized pOT2A  
GC Percent
42  
Chromosome Count
6  
Plasmid Count
0  
ORGANISM NAME
Organism Name Drosophila melanogaster y; cn bw sp
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
ARTHROPODA  
Genus
Drosophila  
Genus Synonyms
  
Species
melanogaster  
Species Synonyms
  
Strain
y; cn bw sp  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 7227
NCBI Kingdom
Eukaryota  
NCBI Phylum
Arthropoda  
NCBI Class
Insecta  
NCBI Order
Diptera  
NCBI Family
Drosophilidae  
NCBI Genus
Drosophila  
NCBI Species
Drosophila melanogaster  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources