PROJECT NAME
GOLD Project ID
Gp0000754  
Project Name
Vibrio cholerae O1 bv El Tor, N16961  
Other Names
  
Legacy ER Project ID
10652  
Legacy ER ID
10652  
Legacy GOLD ID
Gc00034  
NCBI BioProject Name Vibrio cholerae O1 biovar El Tor str. N16961
NCBI BioProject ID 36
NCBI BioProject Accession
PRJNA36  
NCBI Locus Tag
VC  
NCBI Biosample ID SAMN02603969
PI
  
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Complete and Published
Project Relevance Human Pathogen
Medical
Sequencing Center J. Craig Venter Institute (USA)
Collaborating Institute
  
Funding Agency NIH-NIAID (USA)
Project Description
Aquatic organism that causes Cholera  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Wikipedia
Entrez
Taxonomy
Database
  
Genome Publications Nature DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Vibrio cholerae O1 bv El Tor, N16961
Biosamples Vibrio cholerae O1 bv El Tor, N16961
Analysis Projects Vibrio cholerae O1 bv El Tor, N16961
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology
  
Library Method
2?3 kb, lambda library  
Number Of Reads
51164  
Read Size
  
Sequencing Depth
  
Vector
lambda-DASHII/EcoRI  
GC Percent
47  
Chromosome Count
2  
Plasmid Count
0  
ORGANISM NAME
Organism Name Vibrio cholerae O1 bv El Tor, N16961
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Vibrio  
Genus Synonyms
  
Species
cholerae O1  
Species Synonyms
  
Strain
N16961  
Strain Synonyms
  
Serovar-Biovar
biovar El Tor  
Culture Collection ID
ATCC 39315  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 243277
NCBI Kingdom
Bacteria  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Vibrionales  
NCBI Family
Vibrionaceae  
NCBI Genus
Vibrio  
NCBI Species
Vibrio cholerae  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Animal  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Fecal  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 111778
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Curved-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
20 - 30  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
Free living  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Cholera
Diarrhea
Food poisoning
Known Habitats Fresh water
Host
Intestinal tract
Wastewater
Metabolisms
  
Phenotypes Pathogen
Polar flagella
Energy Sources Heterotroph