PROJECT NAME
GOLD Project ID
Gp0000586  
Project Name
Cryptosporidium parvum Iowa II  
Other Names
  
Legacy ER Project ID
10507  
Legacy ER ID
10507  
Legacy GOLD ID
Gc00179  
NCBI BioProject Name Cryptosporidium parvum Iowa
NCBI BioProject ID 144
NCBI BioProject Accession
PRJNA144  
NCBI Locus Tag
  
NCBI Biosample ID
PI
  
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Ioanna Pagani on 2011-01-31
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Nucleic Acid
  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Complete and Published
Project Relevance Animal Pathogen
Human Pathogen
Medical
Sequencing Center
  
Collaborating Institute UCSF (USA)
Univ of Minnesota (USA)
Funding Agency NIH-NIAID (USA)
Project Description
Cryptosporidium parvum Iowa II genome sequencing project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Parasitology
Wikipedia
Database
  
Genome Publications "Science (New York, N.Y.)" "Complete genome sequence of the apicomplexan, Cryptosporidium parvum."
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Cryptosporidium parvum Iowa II
Biosamples Cryptosporidium parvum Iowa II
Analysis Projects Cryptosporidium parvum Iowa II
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology
  
Library Method
2 ? 5 kb and 15kb inserts  
Number Of Reads
120000  
Read Size
  
Sequencing Depth
13.5x  
Vector
lambda clones  
GC Percent
30  
Chromosome Count
8  
Plasmid Count
0  
ORGANISM NAME
Organism Name Cryptosporidium parvum Iowa II
Other names (alias, synonyms, short names, common names)
  
Domain
EUKARYAL  
Phylogeny
PROTISTS-APICOMPLEXA  
Genus
Cryptosporidium  
Genus Synonyms
  
Species
parvum  
Species Synonyms
  
Strain
Iowa II  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 353152
NCBI Kingdom
Eukaryota  
NCBI Phylum
Apicomplexa  
NCBI Class
Coccidia  
NCBI Order
Eucoccidiorida  
NCBI Family
Cryptosporidiidae  
NCBI Genus
Cryptosporidium  
NCBI Species
Cryptosporidium parvum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Diarrhea
Known Habitats Host
Metabolisms
  
Phenotypes Intracellular
Parasite
Pathogen
Energy Sources