PROJECT NAME
GOLD Project ID
Gp0004031  
Project Name
Chlamydia trachomatis sv J, 6276  
Other Names
  
Legacy ER Project ID
14044  
Legacy ER ID
14044  
Legacy GOLD ID
Gi03518  
NCBI BioProject Name Chlamydia trachomatis 6276
NCBI BioProject ID 32183
NCBI BioProject Accession
PRJNA32183  
NCBI Locus Tag
C13  
NCBI Biosample ID SAMN02470780
PI
  
Added By Nikos Kyrpides on 2008-10-17
Last Modified By Jon Bertsch on 2014-06-14
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Nucleic Acid
  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Animal Pathogen
Human Pathogen
Medical
Sequencing Center
  
Collaborating Institute Oregon State University (USA)
Funding Agency
  
Project Description
Clinical isolate  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Wikipedia
Taxonomy
Entrez
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Chlamydia trachomatis sv J, 6276
Biosamples Chlamydia trachomatis sv J, 6276
Analysis Projects Chlamydia trachomatis sv J, 6276
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology Illumina
Solexa
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
200x  
Vector
  
GC Percent
41  
Chromosome Count
1  
Plasmid Count
  
ORGANISM NAME
Organism Name Chlamydia trachomatis sv J, 6276
Other names (alias, synonyms, short names, common names)
  
Domain
BACTERIAL  
Phylogeny
CHLAMYDIAE  
Genus
Chlamydia  
Genus Synonyms
  
Species
trachomatis  
Species Synonyms
  
Strain
sv J, 6276  
Strain Synonyms
  
Serovar-Biovar
J  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 564416
NCBI Kingdom
Bacteria  
NCBI Phylum
Chlamydiae  
NCBI Class
Chlamydiia  
NCBI Order
Chlamydiales  
NCBI Family
Chlamydiaceae  
NCBI Genus
Chlamydia  
NCBI Species
Chlamydia trachomatis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
Symbiotic  
Symbiotic Physical Interaction
Endosymbiotic intracellular  
Symbiotic Relationship
Parasitic  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Urogenital infection
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources