PROJECT NAME
GOLD Project ID
Gp0038812  
Project Name
Alligator mississippiensis  
Other Names
  
Legacy ER Project ID
44659  
Legacy ER ID
44659  
Legacy GOLD ID
Gi0044659  
NCBI BioProject Name Alligator mississippiensis
NCBI BioProject ID 159843
NCBI BioProject Accession
PRJNA159843  
NCBI Locus Tag
  
NCBI Biosample ID
Added By Dinos auto script on 2013-04-02
Last Modified By
  
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Evolution
Sequencing Center International Crocodilian Genomes Working Group
Collaborating Institute
  
Funding Agency
  
Project Description
  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome biology 13(1):415 Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Alligator mississippiensis Genome sequencing
Biosamples Alligator mississippiensis
Analysis Projects Alligator mississippiensis
SEQUENCING INFORMATION
Sequencing Status Draft
Sequencing Quality
  
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology Illumina
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
68x  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Alligator mississippiensis
Other names (alias, synonyms, short names, common names)
  
Domain
EUKARYAL  
Phylogeny
CHORDATA  
Genus
Alligator  
Genus Synonyms
  
Species
mississippiensis  
Species Synonyms
  
Strain
  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 8496
NCBI Kingdom
Eukaryota  
NCBI Phylum
Chordata  
NCBI Class
  
NCBI Order
Crocodylia  
NCBI Family
Alligatoridae  
NCBI Genus
Alligator  
NCBI Species
Alligator mississippiensis  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources