PROJECT NAME
GOLD Project ID
Gp0003858  
Project Name
Bacillus subtilis subtilis JH642  
Other Names
  
Legacy ER Project ID
13757  
Legacy ER ID
13757  
Legacy GOLD ID
Gi03274  
NCBI BioProject Name Bacillus subtilis subsp. subtilis str. JH642
NCBI BioProject ID 29817
NCBI BioProject Accession
PRJNA29817  
NCBI Locus Tag
JH642  
NCBI Biosample ID SAMN02469326
Added By Nikos Kyrpides on 2008-06-11
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Biotechnological
Sequencing Center Baylor College of Medicine (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Well studied isolate  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
MicrobeWiki
Taxonomy
Database
  
Genome Publications PLoS genetics 4(8):e1000139 "High-precision, whole-genome sequencing of laboratory strains facilitates genetic studies."
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Bacillus subtilis subtilis JH642
Biosamples Bacillus subtilis subtilis JH642
Analysis Projects Bacillus subtilis subtilis JH642
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality Level 2: High-Quality Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology
  
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
33x  
Vector
  
GC Percent
43  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Bacillus subtilis subtilis JH642
Other names (alias, synonyms, short names, common names)
  
Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Bacillus  
Genus Synonyms
  
Species
subtilis  
Species Synonyms
  
Strain
JH642  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
BGSC 1A96  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 535025
NCBI Kingdom
Bacteria  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Bacillales  
NCBI Family
Bacillaceae  
NCBI Genus
Bacillus  
NCBI Species
Bacillus subtilis  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Sporulating  
Temperature Range
Mesophile  
Temperature Optimum
25 - 35  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
Free living  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Singles
Diseases None
Known Habitats Soil
Metabolisms
  
Phenotypes
  
Energy Sources