PROJECT NAME
GOLD Project ID
Gp0003796  
Project Name
Pseudomonas aeruginosa PAb1  
Other Names
  
Legacy ER Project ID
134  
Legacy ER ID
134  
Legacy GOLD ID
Gi03127  
NCBI BioProject Name Pseudomonas aeruginosa PAb1
NCBI BioProject ID 28809
NCBI BioProject Accession
PRJNA28809  
NCBI Locus Tag
PAB1  
NCBI Biosample ID SAMN00000299
Added By Nikos Kyrpides on 2008-05-17
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Human Pathogen
Medical
Sequencing Center
  
Collaborating Institute Univ of Maryland (USA)
Funding Agency
  
Project Description
Strain being sequenced for comparative analysis  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Reference
Database
  
Genome Publications PLoS computational biology 4(9):e1000186 Gene-boosted assembly of a novel bacterial genome from very short reads.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Pseudomonas aeruginosa PAb1
Biosamples Pseudomonas aeruginosa PAb1
Analysis Projects Pseudomonas aeruginosa PAb1
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality
  
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology
  
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
40.3x  
Vector
  
GC Percent
67  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Pseudomonas aeruginosa PAb1
Other names (alias, synonyms, short names, common names)
  
Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Pseudomonas  
Genus Synonyms
  
Species
aeruginosa  
Species Synonyms
  
Strain
PAb1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 509633
NCBI Kingdom
Bacteria  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Pseudomonadales  
NCBI Family
Pseudomonadaceae  
NCBI Genus
Pseudomonas  
NCBI Species
Pseudomonas aeruginosa  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
Free living  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Opportunistic infection
Known Habitats Host
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph