PROJECT NAME
GOLD Project ID
Gp0003755  
Project Name
Yersinia ruckeri ATCC 29473  
Other Names
  
Legacy ER Project ID
13676  
Legacy ER ID
13676  
Legacy GOLD ID
Gi03158  
NCBI BioProject Name Yersinia ruckeri ATCC 29473
NCBI BioProject ID 29769
NCBI BioProject Accession
PRJNA29769  
NCBI Locus Tag
YRUCK0001  
NCBI Biosample ID SAMN00005359
PI
  
Added By Nikos Kyrpides on 2008-06-04
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Fish Pathogen
Medical
Sequencing Center Naval Medical Research Center (NMRC) (USA)
Collaborating Institute
  
Funding Agency DOD (USA)
Project Description
Rainbow trout isolate  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Taxonomy
Entrez
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Yersinia ruckeri ATCC 29473
Biosamples Yersinia ruckeri ATCC 29473
Analysis Projects Yersinia ruckeri ATCC 29473
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality
  
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology Sanger
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
37.5x  
Vector
  
GC Percent
47  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Yersinia ruckeri ATCC 29473
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Yersinia  
Genus Synonyms
  
Species
ruckeri  
Species Synonyms
  
Strain
ATCC 29473  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 29473  
Type Strain
  
Exemplar DOI
10.1601/ex.3366  
Exemplar Name
Yersinia ruckeri  
Taxon DOI
10.1601/tx.3366  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 527005
NCBI Kingdom
Bacteria  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacteriales  
NCBI Family
Enterobacteriaceae  
NCBI Genus
Yersinia  
NCBI Species
Yersinia ruckeri  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Fish  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AF366385
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
Free living  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
Onchorhynchus mykiss  
Symbiont Taxon ID
8022  
Cell Arrangements
  
Diseases Enteric Red Mouth Disease
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources Heterotroph