PROJECT NAME
GOLD Project ID
Gp0003712  
Project Name
Bacteroides cellulosilyticus DSM 14838  
Other Names
  
Legacy ER Project ID
13742  
Legacy ER ID
13742  
Legacy GOLD ID
Gi03226  
NCBI BioProject Name Bacteroides cellulosilyticus DSM 14838
NCBI BioProject ID 30027
NCBI BioProject Accession
PRJNA30027  
NCBI Locus Tag
BACCELL  
NCBI Biosample ID SAMN00008759
Added By Heather Creasy on 2008-06-10
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Human Gut Microbiome Initiative (HGMI)
Human Microbiome Project (HMP)
Medical
Sequencing Center Washington University in St. Louis (USA)
Collaborating Institute
  
Funding Agency NIH (USA)
Project Description
Reference genome for the Human Microbiome Project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
HMP
Taxonomy
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Human Microbiome Project (HMP) Reference Genomes
Biosamples Bacteroides cellulosilyticus DSM 14838
Analysis Projects Bacteroides cellulosilyticus DSM 14838
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality Level 2: High-Quality Draft
Finishing Goal Level 2: High-Quality Draft
Sequencing Comments
  
Sequencing Technology 454-GS-FLX
Library Method
  
Number Of Reads
466253  
Read Size
  
Sequencing Depth
16.3x  
Vector
  
GC Percent
43  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Bacteroides cellulosilyticus DSM 14838
Other names (alias, synonyms, short names, common names)
  
Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Bacteroides  
Genus Synonyms
  
Species
cellulosilyticus  
Species Synonyms
  
Strain
CRE21, DSM 14838  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 14838  
Type Strain
  
Exemplar DOI
10.1601/ex.11233  
Exemplar Name
Bacteroides cellulosilyticus  
Taxon DOI
10.1601/tx.11233  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 537012
NCBI Kingdom
Bacteria  
NCBI Phylum
Bacteroidetes  
NCBI Class
Bacteroidia  
NCBI Order
Bacteroidales  
NCBI Family
Bacteroidaceae  
NCBI Genus
Bacteroides  
NCBI Species
Bacteroides cellulosilyticus  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AJ583243
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
Free living  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Host
Human fecal
Human intestinal microflora
Metabolisms Cellulose degrader
Phenotypes
  
Energy Sources
  
HMP METADATA
HMP ID
111  
Show in DACC?
Yes  
HMP Project Status
Complete  
BEI Status
  
NCBI Submission Status
6. annotation (and sequence) public on NCBI site  
Isolate Suggestion Source
  
HMP Isolation Body Sample Site
Gastrointestinal tract  
HMP Isolation Body Sample Subsite
  
HMP Finishing Goal
  
Source, Sample & Medical Relevance Comments
  
Isolate Availability Comments
Yes  
Project Comments
  
DNA Received
Yes  
Date DNA Received
2008-05-20  
Date Sequencing Begins
2008-11-24  
Date Draft Sequencing Completed
2008-12-11  
Cross Reference ID