PROJECT NAME
GOLD Project ID
Gp0036940  
Project Name
Natrinema gari JCM 14663  
Other Names
  
Legacy ER Project ID
42887  
Legacy ER ID
42887  
Legacy GOLD ID
Gi0042887  
NCBI BioProject Name Natrinema gari JCM 14663
NCBI BioProject ID 174935
NCBI BioProject Accession
PRJNA174935  
NCBI Locus Tag
C486  
NCBI Biosample ID SAMN02471627
PI
  
Added By Dinos auto script on 2013-04-02
Last Modified By Auto script update processes on 2014-05-20
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Environmental
Sequencing Center University of California, Davis (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Haloarchaeal genomes
Biosamples Natrinema gari JCM 14663
Analysis Projects Natrinema gari JCM 14663
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality
  
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology Illumina GAIIX; HiSeq
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
200x  
Vector
  
GC Percent
64  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Natrinema gari JCM 14663
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-HALOBACTERIA  
Genus
Natrinema  
Genus Synonyms
  
Species
gari  
Species Synonyms
  
Strain
JCM 14663  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
JCM 14663  
Type Strain
  
Exemplar DOI
10.1601/ex.13465  
Exemplar Name
Natrinema gari  
Taxon DOI
10.1601/tx.13465  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1230459
NCBI Kingdom
Archaea  
NCBI Phylum
Euryarchaeota  
NCBI Class
Halobacteria  
NCBI Order
Halobacteriales  
NCBI Family
Halobacteriaceae  
NCBI Genus
Natrinema  
NCBI Species
Natrinema gari  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AB289741
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
37 - 40  
Salinity
Halophile  
pH
6.0 - 6.5  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Clusters
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources