PROJECT NAME
GOLD Project ID
Gp0034987  
Project Name
Mycoplasma pneumoniae PI 1428  
Other Names
  
Legacy ER Project ID
39722  
Legacy ER ID
39722  
Legacy GOLD ID
Gi23414  
NCBI BioProject Name Mycoplasma pneumoniae PI 1428
NCBI BioProject ID 176271
NCBI BioProject Accession
PRJNA176271  
NCBI Locus Tag
C897  
NCBI Biosample ID SAMN02471520
PI
  
Added By Dinos auto script on 2013-01-15
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance
  
Sequencing Center University of Alabama at Birmingham (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Whole genome shotgun sequencing of strain 1428. Isolate from throat of patient with atypical pneumonia.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Microbiology (Reading, Engl.) 159(Pt 4):737-47 Type 1 and type 2 strains of Mycoplasma pneumoniae form different biofilms.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Mycoplasma pneumoniae sequencing, University of Alabama at Birmingham
Biosamples Mycoplasma pneumoniae PI 1428
Analysis Projects Mycoplasma pneumoniae PI 1428
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality
  
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology Illumina HiSeq
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
300x  
Vector
  
GC Percent
40  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Mycoplasma pneumoniae PI 1428
Other names (alias, synonyms, short names, common names)
  
Domain
BACTERIAL  
Phylogeny
TENERICUTES  
Genus
Mycoplasma  
Genus Synonyms
  
Species
pneumoniae  
Species Synonyms
  
Strain
PI 1428  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1236904
NCBI Kingdom
Bacteria  
NCBI Phylum
Tenericutes  
NCBI Class
Mollicutes  
NCBI Order
Mycoplasmatales  
NCBI Family
Mycoplasmataceae  
NCBI Genus
Mycoplasma  
NCBI Species
Mycoplasma pneumoniae  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources