PROJECT NAME
GOLD Project ID
Gp0034524  
Project Name
Salmonella enterica enterica sv. Newport Henan_3  
Other Names
  
Legacy ER Project ID
39235  
Legacy ER ID
39235  
Legacy GOLD ID
Gi22927  
NCBI BioProject Name Salmonella enterica enterica sv. Newport Henan_3
NCBI BioProject ID 184704
NCBI BioProject Accession
PRJNA184704  
NCBI Locus Tag
G208  
NCBI Biosample ID SAMN02415263
PI
  
Added By Dinos auto script on 2013-01-15
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Nucleic Acid
  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Evolution
Medical
Sequencing Center
  
Collaborating Institute
  
Funding Agency
  
Project Description
Phylogenetic analysis and comparative genomics of Salmonella Newport will be performed.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications 23661485
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Salmonella enterica enterica sv. Enteritidis CDC_2010K_4168
Biosamples Salmonella enterica enterica sv. Newport Henan_3
Analysis Projects Salmonella enterica enterica sv. Newport Henan_3
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality
  
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology Illumina HiSeq 2000
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
42x  
Vector
  
GC Percent
52  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Salmonella enterica enterica sv. Newport Henan_3
Other names (alias, synonyms, short names, common names)
  
Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Salmonella  
Genus Synonyms
  
Species
enterica  
Species Synonyms
  
Strain
Henan_3  
Strain Synonyms
  
Serovar-Biovar
sv. Newport  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1275975
NCBI Kingdom
Bacteria  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacteriales  
NCBI Family
Enterobacteriaceae  
NCBI Genus
Salmonella  
NCBI Species
Salmonella enterica  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Animal  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Fecal  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types