PROJECT NAME
GOLD Project ID
Gp0033818  
Project Name
Halococcus hamelinensis 100A6  
Other Names
  
Legacy ER Project ID
38522  
Legacy ER ID
38522  
Legacy GOLD ID
Gi21771  
NCBI BioProject Name Halococcus hamelinensis 100A6
NCBI BioProject ID 174896
NCBI BioProject Accession
PRJNA174896  
NCBI Locus Tag
C447  
NCBI Biosample ID SAMN02471661
PI
  
Added By Dinos auto script on 2012-11-08
Last Modified By Auto script update processes on 2014-05-20
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance
  
Sequencing Center University of California, Davis (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Haloarchaeal genomes  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Halococcus hamelinensis 100A6
Biosamples Halococcus hamelinensis 100A6
Analysis Projects Halococcus hamelinensis 100A6
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality
  
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology Illumina GAIIX; HiSeq
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
200x  
Vector
  
GC Percent
65  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Halococcus hamelinensis 100A6
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-HALOBACTERIA  
Genus
Halococcus  
Genus Synonyms
  
Species
hamelinensis  
Species Synonyms
  
Strain
100A6  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
JCM 12892  
Type Strain
  
Exemplar DOI
10.1601/ex.10084  
Exemplar Name
Halococcus hamelinensis  
Taxon DOI
10.1601/tx.10084  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1132509
NCBI Kingdom
Archaea  
NCBI Phylum
Euryarchaeota  
NCBI Class
Halobacteria  
NCBI Order
Halobacteriales  
NCBI Family
Halobacteriaceae  
NCBI Genus
Halococcus  
NCBI Species
Halococcus hamelinensis  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AB301068
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
Halophile  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
Free living  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Clusters
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources