PROJECT NAME
GOLD Project ID
Gp0003240  
Project Name
Salmonella enterica enterica sv Typhi 404ty  
Other Names
  
Legacy ER Project ID
13552  
Legacy ER ID
13552  
Legacy GOLD ID
Gi02969  
NCBI BioProject Name Salmonella enterica subsp. enterica serovar Typhi str. 404ty
NCBI BioProject ID 28289
NCBI BioProject Accession
PRJEA28289  
NCBI Locus Tag
STY404  
NCBI Biosample ID
Added By Nikos Kyrpides on 2008-01-23
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Human Pathogen
Medical
Sequencing Center Sanger Institute (United Kingdom)
Collaborating Institute
  
Funding Agency Wellcome Trust (United Kingdom)
Project Description
Clinical isolate from Indonesia  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Salmonella enterica enterica sv Typhi 404ty
Biosamples Salmonella enterica enterica sv Typhi 404ty
Analysis Projects Salmonella enterica enterica sv Typhi 404ty
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality
  
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology 454-GS20
Solexa
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
8.5x 454, 24.6 Solexa  
Vector
  
GC Percent
52  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Salmonella enterica enterica sv Typhi 404ty
Other names (alias, synonyms, short names, common names)
  
Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Salmonella  
Genus Synonyms
  
Species
enterica  
Species Synonyms
  
Strain
404ty  
Strain Synonyms
  
Serovar-Biovar
sv Typhi  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 497977
NCBI Kingdom
Bacteria  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacteriales  
NCBI Family
Enterobacteriaceae  
NCBI Genus
Salmonella  
NCBI Species
Salmonella enterica  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
Free living  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Pairs
Singles
Diseases Typhoid fever
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources Chemoorganotroph