PROJECT NAME
GOLD Project ID
Gp0003174  
Project Name
Carica papaya SunUp  
Other Names
  
Legacy ER Project ID
13094  
Legacy ER ID
13094  
Legacy GOLD ID
Gi01929  
NCBI BioProject Name Carica papaya SunUp
NCBI BioProject ID 20267
NCBI BioProject Accession
PRJNA20267  
NCBI Locus Tag
CAPA  
NCBI Biosample ID
PI
  
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Nikos Kyrpides on 2008-01-13
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance
  
Sequencing Center
  
Collaborating Institute
  
Funding Agency
  
Project Description
Carica papaya  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Taxonomy
Entrez
Database
  
Genome Publications Nature 452(7190):991-6 The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus).
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Carica papaya SunUp
Biosamples Carica papaya SunUp
Analysis Projects Carica papaya SunUp
SEQUENCING INFORMATION
Sequencing Status Draft
Sequencing Quality
  
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology
  
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
3x  
Vector
  
GC Percent
  
Chromosome Count
9  
Plasmid Count
0  
ORGANISM NAME
Organism Name Carica papaya SunUp
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
PLANTS-STREPTOPHYTA  
Genus
Carica  
Genus Synonyms
  
Species
papaya  
Species Synonyms
  
Strain
SunUp  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 3649
NCBI Kingdom
Eukaryota  
NCBI Phylum
Streptophyta  
NCBI Class
  
NCBI Order
Brassicales  
NCBI Family
Caricaceae  
NCBI Genus
Carica  
NCBI Species
Carica papaya  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources