PROJECT NAME
GOLD Project ID
Gp0003108  
Project Name
Ornithorhynchus anatinus  
Other Names
  
Legacy ER Project ID
13025  
Legacy ER ID
13025  
Legacy GOLD ID
Gi00420, Gc00781  
NCBI BioProject Name Ornithorhynchus anatinus
NCBI BioProject ID 12885
NCBI BioProject Accession
PRJNA12885  
NCBI Locus Tag
  
NCBI Biosample ID SAMN00738164
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Ioanna Pagani on 2011-01-27
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Complete and Published
Project Relevance Model Organism
Sequencing Center Washington University in St. Louis (USA)
Collaborating Institute
  
Funding Agency NIH-NHGRI (USA)
Project Description
6X whole genome shotgun assembly by Washington University Genome Sequencing Center  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Taxonomy
Proposal
Entrez
Database
  
Genome Publications Nature 453(7192):175-83 Genome analysis of the platypus reveals unique signatures of evolution.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Ornithorhynchus anatinus
Biosamples Ornithorhynchus anatinus
Analysis Projects Ornithorhynchus anatinus
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology Sanger
Library Method
whole-genome plasmid, fosmid and bacterial artificial chromosome (BAC) reads  
Number Of Reads
26900000  
Read Size
  
Sequencing Depth
6x  
Vector
  
GC Percent
  
Chromosome Count
52  
Plasmid Count
0  
ORGANISM NAME
Organism Name Ornithorhynchus anatinus
Other names (alias, synonyms, short names, common names)
  
Domain
EUKARYAL  
Phylogeny
CHORDATA  
Genus
Ornithorhynchus  
Genus Synonyms
  
Species
anatinus  
Species Synonyms
  
Strain
  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 9258
NCBI Kingdom
Eukaryota  
NCBI Phylum
Chordata  
NCBI Class
Mammalia  
NCBI Order
Monotremata  
NCBI Family
Ornithorhynchidae  
NCBI Genus
Ornithorhynchus  
NCBI Species
Ornithorhynchus anatinus  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources