PROJECT NAME
GOLD Project ID
Gp0002938  
Project Name
Strongylocentrotus purpuratus A3  
Other Names
  
Legacy ER Project ID
12857  
Legacy ER ID
12857  
Legacy GOLD ID
Gi00632  
NCBI BioProject Name Strongylocentrotus purpuratus
NCBI BioProject ID 10736
NCBI BioProject Accession
PRJNA10736  
NCBI Locus Tag
SPU  
NCBI Biosample ID SAMN00829422
Added By Nikos Kyrpides on 2007-11-27
Last Modified By
  
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Evolution
Model Organism
Sequencing Center
  
Collaborating Institute
  
Funding Agency Stowers Institute for Medical Research (USA)
Project Description
Genome sequencing for Strongylocentrotus purpuratus  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Taxonomy
Entrez
Davidson Lab
Publication
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Strongylocentrotus purpuratus A3
Biosamples Strongylocentrotus purpuratus A3
Analysis Projects Strongylocentrotus purpuratus A3
SEQUENCING INFORMATION
Sequencing Status Draft
Sequencing Quality
  
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology Sanger
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
8.3x Sanger; 18x SOLiD; 40x Illumina  
Vector
  
GC Percent
  
Chromosome Count
20  
Plasmid Count
0  
ORGANISM NAME
Organism Name Strongylocentrotus purpuratus A3
Other names (alias, synonyms, short names, common names)
  
Domain
EUKARYAL  
Phylogeny
ECHINODERMATA  
Genus
Strongylocentrotus  
Genus Synonyms
  
Species
purpuratus  
Species Synonyms
  
Strain
A3  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 7668
NCBI Kingdom
Eukaryota  
NCBI Phylum
Echinodermata  
NCBI Class
Echinoidea  
NCBI Order
Echinoida  
NCBI Family
Strongylocentrotidae  
NCBI Genus
Strongylocentrotus  
NCBI Species
Strongylocentrotus purpuratus  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Fresh water
Metabolisms
  
Phenotypes
  
Energy Sources