PROJECT NAME
GOLD Project ID
Gp0002765  
Project Name
Trichinella spiralis  
Other Names
  
Legacy ER Project ID
12671  
Legacy ER ID
12671  
Legacy GOLD ID
Gi00757  
NCBI BioProject Name Trichinella spiralis
NCBI BioProject ID 12603
NCBI BioProject Accession
PRJNA12603  
NCBI Locus Tag
TSP  
NCBI Biosample ID
PI
  
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Tatiparthi B. Reddy on 2012-11-21
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Evolution
Sequencing Center Washington University in St. Louis (USA)
Collaborating Institute
  
Funding Agency NIAID (USA)
NIH-NHGRI (USA)
Project Description
Trichinella spiralis genome sequencing project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Taxonomy
Entrez
Database
  
Genome Publications Nature genetics 43(3):228-35 The draft genome of the parasitic nematode Trichinella spiralis.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Trichinella spiralis
Biosamples Trichinella spiralis
Analysis Projects Trichinella spiralis
SEQUENCING INFORMATION
Sequencing Status Draft
Sequencing Quality
  
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology ABI 3730
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
34.6x  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Trichinella spiralis
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
NEMATODES  
Genus
Trichinella  
Genus Synonyms
  
Species
spiralis  
Species Synonyms
  
Strain
  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 6334
NCBI Kingdom
Eukaryota  
NCBI Phylum
Nematoda  
NCBI Class
Enoplea  
NCBI Order
Trichocephalida  
NCBI Family
Trichinellidae  
NCBI Genus
Trichinella  
NCBI Species
Trichinella spiralis  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources