PROJECT NAME
GOLD Project ID
Gp0002605  
Project Name
Coprinopsis cinerea okayama7#130  
Other Names
  
Legacy ER Project ID
12504  
Legacy ER ID
12504  
Legacy GOLD ID
Gi01113  
NCBI BioProject Name Coprinopsis cinerea okayama7#130
NCBI BioProject ID 1447
NCBI BioProject Accession
PRJNA1447  
NCBI Locus Tag
CC1G  
NCBI Biosample ID
PI Broad Institute
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-02-05
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Evolution
Fungal Genome Initiative (FGI)
Sequencing Center Broad Institute (USA)
Collaborating Institute
  
Funding Agency NIH-NHGRI (USA)
NSF (USA)
Project Description
WGS sequencing by the Broad Institute  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Taxonomy
Fungi at NCBI
Proposal
Entrez
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America 107(26):11889-94 Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus).
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Coprinopsis cinerea okayama7#130
Biosamples Coprinopsis cinerea okayama7#130
Analysis Projects Coprinopsis cinerea okayama7#130
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality
  
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology Sanger
Library Method
4-kb and 10-kb plasmids and 40-kb fosmids, BACs  
Number Of Reads
  
Read Size
  
Sequencing Depth
10x  
Vector
  
GC Percent
52  
Chromosome Count
13  
Plasmid Count
0  
ORGANISM NAME
Organism Name Coprinopsis cinerea okayama7#130
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-BASIDIOMYCOTA  
Genus
Coprinopsis  
Genus Synonyms
Coprinus  
Species
cinerea  
Species Synonyms
cinereus  
Strain
okayama7#130  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 240176
NCBI Kingdom
Eukaryota  
NCBI Phylum
Basidiomycota  
NCBI Class
Agaricomycetes  
NCBI Order
Agaricales  
NCBI Family
Psathyrellaceae  
NCBI Genus
Coprinopsis  
NCBI Species
Coprinopsis cinerea  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats
  
Metabolisms
  
Phenotypes Multicellular
Non-Pathogen
Energy Sources