PROJECT NAME
GOLD Project ID
Gp0002590  
Project Name
Coccidioides immitis H538.4  
Other Names
  
Legacy ER Project ID
12489  
Legacy ER ID
12489  
Legacy GOLD ID
Gi01213  
NCBI BioProject Name Coccidioides immitis H538.4
NCBI BioProject ID 17355
NCBI BioProject Accession
PRJNA17355  
NCBI Locus Tag
CIHG  
NCBI Biosample ID
PI MCS
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Dinos auto script on 2011-09-21
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Biothreat
Fungal Genome Initiative (FGI)
Human Pathogen
Medical
Sequencing Center Broad Institute (USA)
Collaborating Institute
  
Funding Agency NIH-NIAID (USA)
Project Description
WGS sequencing and assembly  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Coccidioides immitis H538.4
Biosamples Coccidioides immitis H538.4
Analysis Projects Coccidioides immitis H538.4
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality Level 1: Standard Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology Sanger
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
3.41x  
Vector
  
GC Percent
47  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Coccidioides immitis H538.4
Other names (alias, synonyms, short names, common names)
  
Domain
EUKARYAL  
Phylogeny
FUNGI-ASCOMYCOTA  
Genus
Coccidioides  
Genus Synonyms
  
Species
immitis  
Species Synonyms
  
Strain
H538.4  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 396776
NCBI Kingdom
Eukaryota  
NCBI Phylum
Ascomycota  
NCBI Class
Eurotiomycetes  
NCBI Order
Onygenales  
NCBI Family
  
NCBI Genus
Coccidioides  
NCBI Species
Coccidioides immitis  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Coccidioidomycosis
Valley fever
Known Habitats Host
Soil
Metabolisms
  
Phenotypes Pathogen
Energy Sources