PROJECT NAME
GOLD Project ID
Gp0002581  
Project Name
Candida (Clavispora) lusitaniae ATCC 42720  
Other Names
  
Legacy ER Project ID
12479  
Legacy ER ID
12479  
Legacy GOLD ID
Gi00129  
NCBI BioProject Name Clavispora lusitaniae ATCC 42720
NCBI BioProject ID 12753
NCBI BioProject Accession
PRJNA12753  
NCBI Locus Tag
CLUG  
NCBI Biosample ID
PI
  
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-02-06
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Fungal Genome Initiative (FGI)
Human Pathogen
Medical
Sequencing Center Broad Institute (USA)
Collaborating Institute
  
Funding Agency NIH-NHGRI (USA)
Project Description
WGS sequencing and assembly of strain ATCC 42720  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Proposal
Database
  
Genome Publications Nature 459(7247):657-62 Evolution of pathogenicity and sexual reproduction in eight Candida genomes.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Candida (Clavispora) lusitaniae ATCC 42720
Biosamples Candida (Clavispora) lusitaniae ATCC 42720
Analysis Projects Candida (Clavispora) lusitaniae ATCC 42720
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality
  
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology Sanger
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
9x  
Vector
  
GC Percent
44  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Candida (Clavispora) lusitaniae ATCC 42720
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-ASCOMYCOTA  
Genus
Candida (Clavispora)  
Genus Synonyms
  
Species
lusitaniae  
Species Synonyms
  
Strain
ATCC 42720  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 42720  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 306902
NCBI Kingdom
Eukaryota  
NCBI Phylum
Ascomycota  
NCBI Class
Saccharomycetes  
NCBI Order
Saccharomycetales  
NCBI Family
Metschnikowiaceae  
NCBI Genus
Clavispora  
NCBI Species
Clavispora lusitaniae  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Circulatory system  
Ecosystem Subtype
Blood  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Candidemia
Candidiasis
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources