PROJECT NAME
GOLD Project ID
Gp0000256  
Project Name
Mycobacterium avium 104  
Other Names
  
Legacy ER Project ID
10223  
Legacy ER ID
10223  
Legacy GOLD ID
Gi00380, Gc00462  
NCBI BioProject Name Mycobacterium avium 104
NCBI BioProject ID 88
NCBI BioProject Accession
PRJNA88  
NCBI Locus Tag
MAV  
NCBI Biosample ID SAMN02603981
PI
  
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Complete and Published
Project Relevance Animal Pathogen
Human Pathogen
Medical
Sequencing Center J. Craig Venter Institute (USA)
Collaborating Institute
  
Funding Agency NIH-NIAID (USA)
Project Description
Causative agent of mycobacterial disease in children, the aged, and in immunocompromised individuals.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Wikipedia
Entrez
Taxonomy
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Mycobacterium avium 104
Biosamples Mycobacterium avium 104
Analysis Projects Mycobacterium avium 104
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology
  
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
  
Vector
  
GC Percent
69  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
Organism Name Mycobacterium avium 104
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Mycobacterium  
Genus Synonyms
  
Species
avium  
Species Synonyms
  
Strain
104  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 243243
NCBI Kingdom
Bacteria  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Actinomycetales  
NCBI Family
Mycobacteriaceae  
NCBI Genus
Mycobacterium  
NCBI Species
Mycobacterium avium  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
Free living  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Respiratory infection
Tuberculosis type pulmonary infection
Known Habitats Fresh water
Host
Soil
Metabolisms
  
Phenotypes Pathogen
Energy Sources Chemoorganotroph