PROJECT NAME
GOLD Project ID
Gp0002423  
Project Name
Plasmodium chabaudi chabaudi AS  
Other Names
  
Legacy ER Project ID
12312  
Legacy ER ID
12312  
Legacy GOLD ID
Gi00464  
NCBI BioProject Name Plasmodium chabaudi chabaudi
NCBI BioProject ID 147
NCBI BioProject Accession
PRJNA147  
NCBI Locus Tag
  
NCBI Biosample ID
PI Berriman M
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Tatiparthi B. Reddy on 2013-07-12
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Animal Pathogen
Medical
Rodent Pathogen
Sequencing Center Sanger Institute (United Kingdom)
Collaborating Institute
  
Funding Agency
  
Project Description
Plasmodium chabaudi whole genome shotgun sequencing project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Taxonomy
Publication
Wikipedia
Entrez
Database
  
Genome Publications "Science (New York, N.Y.)" "A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses."
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Plasmodium chabaudi chabaudi AS
Biosamples Plasmodium chabaudi chabaudi AS
Analysis Projects Plasmodium chabaudi chabaudi AS
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality Level 1: Standard Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology Sanger
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
8x  
Vector
  
GC Percent
24  
Chromosome Count
14  
Plasmid Count
0  
ORGANISM NAME
Organism Name Plasmodium chabaudi chabaudi AS
Other names (alias, synonyms, short names, common names)
  
Domain
EUKARYAL  
Phylogeny
PROTISTS-APICOMPLEXA  
Genus
Plasmodium  
Genus Synonyms
  
Species
chabaudi chabaudi  
Species Synonyms
  
Strain
AS  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 31271
NCBI Kingdom
Eukaryota  
NCBI Phylum
Apicomplexa  
NCBI Class
Aconoidasida  
NCBI Order
Haemosporida  
NCBI Family
  
NCBI Genus
Plasmodium  
NCBI Species
Plasmodium chabaudi  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Malaria
Known Habitats Host
Metabolisms
  
Phenotypes Parasite
Pathogen
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types