PROJECT NAME
GOLD Project ID
Gp0002420  
Project Name
Perkinsus marinus PmCV4CB5 2B3 D4  
Other Names
  
Legacy ER Project ID
12309  
Legacy ER ID
12309  
Legacy GOLD ID
Gi00442  
NCBI BioProject Name Perkinsus marinus ATCC 50983
NCBI BioProject ID 12737
NCBI BioProject Accession
PRJNA12737  
NCBI Locus Tag
PMAR  
NCBI Biosample ID
PI Gardner MJ
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Ioanna Pagani on 2011-11-03
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Nucleic Acid
  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Molluscs Pathogen
Sequencing Center J. Craig Venter Institute (USA)
Collaborating Institute
  
Funding Agency NSF (USA)
Project Description
The whole genome sequence of Perkinsus marinus  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Perkinsus marinus PmCV4CB5 2B3 D4
Biosamples Perkinsus marinus PmCV4CB5 2B3 D4
Analysis Projects Perkinsus marinus PmCV4CB5 2B3 D4
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality
  
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology
  
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
  
Vector
  
GC Percent
47  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Perkinsus marinus PmCV4CB5 2B3 D4
Other names (alias, synonyms, short names, common names)
  
Domain
EUKARYAL  
Phylogeny
PROTISTS-ALVEOLATA  
Genus
Perkinsus  
Genus Synonyms
  
Species
marinus  
Species Synonyms
  
Strain
PmCV4CB5 2B3 D4  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 50983  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 423536
NCBI Kingdom
Eukaryota  
NCBI Phylum
  
NCBI Class
  
NCBI Order
Perkinsida  
NCBI Family
Perkinsidae  
NCBI Genus
Perkinsus  
NCBI Species
Perkinsus marinus  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Dermo
Known Habitats Host
Metabolisms
  
Phenotypes Parasite
Pathogen
Energy Sources