PROJECT NAME
GOLD Project ID
Gp0002298  
Project Name
Ferroplasma acidarmanus Fer1  
Other Names
Ferroplasma acidarmanus fer1  
Legacy ER Project ID
12194  
Legacy ER ID
12194  
Legacy GOLD ID
Gi00249, Gc0012194  
NCBI BioProject Name Ferroplasma acidarmanus fer1
NCBI BioProject ID 239
NCBI BioProject Accession
PRJNA239  
NCBI Locus Tag
Faci  
NCBI Biosample ID SAMN02604346
PI Banfield, Jill
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Complete and Published
Project Relevance Bioremediation
Environmental
Sequencing Center DOE Joint Genome Institute (USA)
Collaborating Institute
  
Funding Agency DOE (USA)
Project Description
Acidophilic archeon  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Gm00001
DOE-report
ArchaeaWeb
Iron-Eating Microbe
Reference
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America Genome dynamics in a natural archaeal population.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Ferroplasma acidarmanus fer1
Biosamples Ferroplasma acidarmanus Fer1
Analysis Projects Ferroplasma acidarmanus Fer1
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology Sanger
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
  
Vector
  
GC Percent
37  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
Organism Name Ferroplasma acidarmanus Fer1
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-THERMOPLASMATA  
Genus
Ferroplasma  
Genus Synonyms
  
Species
acidarmanus  
Species Synonyms
  
Strain
Fer1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
No  
Culture Type
  
Organism Type
Natural  
Uncultured Type Population enrichment
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 333146
NCBI Kingdom
Archaea  
NCBI Phylum
Euryarchaeota  
NCBI Class
Thermoplasmata  
NCBI Order
Thermoplasmatales  
NCBI Family
Ferroplasmaceae  
NCBI Genus
Ferroplasma  
NCBI Species
Ferroplasma acidarmanus  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Geologic  
Ecosystem Subtype
Mine  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
Free living  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats
  
Metabolisms
  
Phenotypes Acidophile
Energy Sources