PROJECT NAME
GOLD Project ID
Gp0002247  
Project Name
Comamonas testosteroni KF-1  
Other Names
Comamonas testosteroni KF-1  
Legacy ER Project ID
12144  
Legacy ER ID
12144  
Legacy GOLD ID
Gi01330  
NCBI BioProject Name Comamonas testosteroni KF-1
NCBI BioProject ID 17465
NCBI BioProject Accession
PRJNA17465  
NCBI Locus Tag
Ctes  
NCBI Biosample ID SAMN02441780
PI David Schleheck
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-05-20
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Biotechnological
Sequencing Center DOE Joint Genome Institute (USA)
Collaborating Institute
  
Funding Agency DOE (USA)
Project Description
Surfactant-degrading bacterium  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Database
  
Genome Publications Standards in genomic sciences 8(2):239-54 Permanent draft genome sequence of Comamonas testosteroni KF-1.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies LAS biofilm Proposal # 0183-051117
Biosamples Comamonas testosteroni KF-1
Analysis Projects Comamonas testosteroni KF-1
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology Sanger
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
12.8x  
Vector
  
GC Percent
62  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Comamonas testosteroni KF-1
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
Comamonas  
Genus Synonyms
Pseudomonas  
Species
testosteroni  
Species Synonyms
  
Strain
KF-1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 14576  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 399795
NCBI Kingdom
Bacteria  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Burkholderiales  
NCBI Family
Comamonadaceae  
NCBI Genus
Comamonas  
NCBI Species
Comamonas testosteroni  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Wastewater  
Ecosystem Type
Activated Sludge  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List Comamonas testosteroni KF-1
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
Free living  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Host
Sludge
Wastewater
Metabolisms Surfactant-degrading
Phenotypes
  
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types