PROJECT NAME
GOLD Project ID
Gp0002238  
Project Name
Burkholderia ambifaria IOP40-10  
Other Names
Burkholderia ambifaria IOP40-10  
Legacy ER Project ID
12135  
Legacy ER ID
12135  
Legacy GOLD ID
Gi01587  
NCBI BioProject Name Burkholderia ambifaria IOP40-10
NCBI BioProject ID 20669
NCBI BioProject Accession
PRJNA20669  
NCBI Locus Tag
BamIOP4010  
NCBI Biosample ID SAMN00000046
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Agricultural
Biocontrol
Biotechnological
Sequencing Center DOE Joint Genome Institute (USA)
Collaborating Institute
  
Funding Agency DOE (USA)
Project Description
Prairie grass rhizosphere isolate  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Isolation
Information
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies CSP_777420
Biosamples Burkholderia ambifaria IOP40-10
Analysis Projects Burkholderia ambifaria IOP40-10
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality Level 1: Standard Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology
  
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
  
Vector
  
GC Percent
66  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Burkholderia ambifaria IOP40-10
Other names (alias, synonyms, short names, common names)
  
Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
Burkholderia  
Genus Synonyms
  
Species
ambifaria  
Species Synonyms
  
Strain
IOP40-10  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 396596
NCBI Kingdom
Bacteria  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Burkholderiales  
NCBI Family
Burkholderiaceae  
NCBI Genus
Burkholderia  
NCBI Species
Burkholderia ambifaria  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
28  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
Grass  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Host
Rhizosphere
Rhizosphere-colonizing
Soil
Metabolisms Nitrogen fixation
Pollutant degrader
Phenotypes
  
Energy Sources