PROJECT NAME
GOLD Project ID
Gp0020667  
Project Name
Rheinheimera nanhaiensis E407-8  
Other Names
  
Legacy ER Project ID
9890  
Legacy ER ID
9890  
Legacy GOLD ID
Gi16979  
NCBI BioProject Name Rheinheimera nanhaiensis E407-8
NCBI BioProject ID 126237
NCBI BioProject Accession
PRJDB83  
NCBI Locus Tag
RNAN  
NCBI Biosample ID
Added By Dinos auto script on 2012-04-04
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Environmental
Sequencing Center ShanDong University (China)
Collaborating Institute
  
Funding Agency
  
Project Description
draft genome sequence of Rheinheimera nanhaiensis E407-8  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 194(24):7001-2 "Genome sequence of the protease-producing bacterium Rheinheimera nanhaiensis E407-8T, isolated from deep-sea sediment of the South China Sea."
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Rheinheimera nanhaiensis E407-8
Biosamples Rheinheimera nanhaiensis E407-8
Analysis Projects Rheinheimera nanhaiensis E407-8
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality
  
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology Illumina Solexa
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
127x  
Vector
  
GC Percent
51  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Rheinheimera nanhaiensis E407-8
Other names (alias, synonyms, short names, common names)
  
Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Rheinheimera  
Genus Synonyms
  
Species
nanhaiensis  
Species Synonyms
  
Strain
E407-8  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
KACC 14030  
Type Strain
  
Exemplar DOI
10.1601/ex.21399  
Exemplar Name
Rheinheimera nanhaiensis  
Taxon DOI
10.1601/tx.21399  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 562729
NCBI Kingdom
Bacteria  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Chromatiales  
NCBI Family
Chromatiaceae  
NCBI Genus
Rheinheimera  
NCBI Species
Rheinheimera nanhaiensis  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 865629
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
37 C  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
Free living  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph