PROJECT NAME
GOLD Project ID
Gp0000206  
Project Name
Ustilago maydis 521  
Other Names
  
Legacy ER Project ID
10178  
Legacy ER ID
10178  
Legacy GOLD ID
Gc00507, Gi0010178  
NCBI BioProject Name Ustilago maydis 521
NCBI BioProject ID 1446
NCBI BioProject Accession
PRJNA1446  
NCBI Locus Tag
UM  
NCBI Biosample ID
PI Kahmann R
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Ioanna Pagani on 2011-01-28
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Agricultural
Fungal Genome Initiative (FGI)
Plant Pathogen
Sequencing Center Bayer (USA)
Broad Institute (USA)
LION Bioscience AG (Germany)
Collaborating Institute
  
Funding Agency NIH-NHGRI (USA)
Project Description
WGS sequencing, assembly, and annotation  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Pest Management
Proposal
Fungi at NCBI
Wikipedia
Database
  
Genome Publications Nature Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Ustilago maydis 521
Biosamples Ustilago maydis 521
Analysis Projects
  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality Level 2: High-Quality Draft
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology Sanger
Library Method
4 kb, 10 kb and 40 kb  
Number Of Reads
287728  
Read Size
  
Sequencing Depth
10x  
Vector
  
GC Percent
54  
Chromosome Count
23  
Plasmid Count
0  
ORGANISM NAME
Organism Name Ustilago maydis 521
Other names (alias, synonyms, short names, common names)
  
Domain
EUKARYAL  
Phylogeny
FUNGI-BASIDIOMYCOTA  
Genus
Ustilago  
Genus Synonyms
  
Species
maydis  
Species Synonyms
  
Strain
521  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 237631
NCBI Kingdom
Eukaryota  
NCBI Phylum
Basidiomycota  
NCBI Class
Ustilaginomycetes  
NCBI Order
Ustilaginales  
NCBI Family
Ustilaginaceae  
NCBI Genus
Ustilago  
NCBI Species
Ustilago maydis  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 470636
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Corn smut
Known Habitats
  
Metabolisms
  
Phenotypes Pathogen
Energy Sources