PROJECT NAME
GOLD Project ID
Gp0001781  
Project Name
Polaribacter irgensii 23-P  
Other Names
  
Legacy ER Project ID
11679  
Legacy ER ID
11679  
Legacy GOLD ID
Gi00871  
NCBI BioProject Name Polaribacter irgensii 23-P
NCBI BioProject ID 13451
NCBI BioProject Accession
PRJNA13451  
NCBI Locus Tag
PI  
NCBI Biosample ID SAMN02436114
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Environmental
Marine Microbial Initiative (MMI)
Sequencing Center J. Craig Venter Institute (USA)
Collaborating Institute Desert Research Institute (USA)
Funding Agency Moore Foundation (USA)
Project Description
Initially thought to be a resident of polar sea ice environments, relatives of this strain are cosmopolitan members of the global marine bacterioplankton community; over 100 sequences (environmental sequences, isolates), from sea ice, and the seawater. Numerically dominant in polar ecosystems (comprised 5% of our rDNA clone library). In polar environments, relatives of this organism important in metabolism of polysaccharides.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Isolation
Taxonomy
Information
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Polaribacter irgensii 23-P
Biosamples Polaribacter irgensii 23-P
Analysis Projects Polaribacter irgensii 23-P
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality
  
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology Sanger
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
  
Vector
  
GC Percent
35  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Polaribacter irgensii 23-P
Other names (alias, synonyms, short names, common names)
  
Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Polaribacter  
Genus Synonyms
  
Species
irgensii  
Species Synonyms
  
Strain
23-P  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 700398  
Type Strain
  
Exemplar DOI
10.1601/ex.8181  
Exemplar Name
Polaribacter irgensii  
Taxon DOI
10.1601/tx.8181  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 313594
NCBI Kingdom
Bacteria  
NCBI Phylum
Bacteroidetes  
NCBI Class
Flavobacteriia  
NCBI Order
Flavobacteriales  
NCBI Family
Flavobacteriaceae  
NCBI Genus
Polaribacter  
NCBI Species
Polaribacter irgensii  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Psychrophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
Free living  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Aquatic
Marine
Surface water
Metabolisms
  
Phenotypes
  
Energy Sources