PROJECT NAME
GOLD Project ID
Gp0017326  
Project Name
Gordonia amarae NBRC 15530  
Other Names
  
Legacy ER Project ID
7828  
Legacy ER ID
7828  
Legacy GOLD ID
Gi13544  
NCBI BioProject Name Gordonia amarae NBRC 15530
NCBI BioProject ID 71719
NCBI BioProject Accession
PRJNA71719  
NCBI Locus Tag
GOAMR  
NCBI Biosample ID
PI
  
Added By Dinos auto script on 2012-02-02
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance
  
Sequencing Center
  
Collaborating Institute National Institute of Technology and Evaluation (NITE) (Japan)
Funding Agency
  
Project Description
Gordonia amarae NBRC 15530 Genome Sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Gordonia amarae NBRC 15530
Biosamples Gordonia amarae NBRC 15530
Analysis Projects Gordonia amarae NBRC 15530
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality
  
Finishing Goal Level 5: Non-contiguous Finished
Sequencing Comments
  
Sequencing Technology 454
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
25x  
Vector
  
GC Percent
67  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Gordonia amarae NBRC 15530
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Gordonia  
Genus Synonyms
  
Species
amarae  
Species Synonyms
  
Strain
NBRC 15530  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
NBRC 15530  
Type Strain
  
Exemplar DOI
10.1601/ex.6422  
Exemplar Name
Gordonia amarae  
Taxon DOI
10.1601/tx.6291  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1075090
NCBI Kingdom
Bacteria  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Actinomycetales  
NCBI Family
Gordoniaceae  
NCBI Genus
Gordonia  
NCBI Species
Gordonia amarae  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Wastewater  
Ecosystem Type
Activated Sludge  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
Free living  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Sludge
Wastewater
Metabolisms
  
Phenotypes
  
Energy Sources