PROJECT NAME
GOLD Project ID
Gp0001596  
Project Name
Microscilla marina ATCC 23134  
Other Names
  
Legacy ER Project ID
11493  
Legacy ER ID
11493  
Legacy GOLD ID
Gi00853  
NCBI BioProject Name Microscilla marina ATCC 23134
NCBI BioProject ID 13411
NCBI BioProject Accession
PRJNA13411  
NCBI Locus Tag
M23134  
NCBI Biosample ID SAMN02436130
PI
  
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Nucleic Acid
  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Environmental
Marine Microbial Initiative (MMI)
Sequencing Center J. Craig Venter Institute (USA)
Kalmar University (Sweden)
Marine Microbial Ecology (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
M. marina closely related to Cytophaga sequences in environmental clone libraries of particle-associated bacteria; very closely related sequences in libraries from Trichodesmium colonies; M. marina produces a siderophore, could be important in Fe acquisition by Trichodesmium.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Information
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Microscilla marina ATCC 23134
Biosamples Microscilla marina ATCC 23134
Analysis Projects Microscilla marina ATCC 23134
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality
  
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology Sanger
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
  
Vector
  
GC Percent
41  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Microscilla marina ATCC 23134
Other names (alias, synonyms, short names, common names)
  
Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Microscilla  
Genus Synonyms
  
Species
marina  
Species Synonyms
  
Strain
ATCC 23134  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 23134  
Type Strain
  
Exemplar DOI
10.1601/ex.8311  
Exemplar Name
Microscilla marina  
Taxon DOI
10.1601/tx.8311  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 313606
NCBI Kingdom
Bacteria  
NCBI Phylum
Bacteroidetes  
NCBI Class
Cytophagia  
NCBI Order
Cytophagales  
NCBI Family
Cytophagaceae  
NCBI Genus
Microscilla  
NCBI Species
Microscilla marina  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Aquaculture  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID M58793
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Filament-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
Free living  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Marine
Metabolisms
  
Phenotypes
  
Energy Sources