PROJECT NAME
GOLD Project ID
Gp0001554  
Project Name
Listeria monocytogenes 1/2a F6854  
Other Names
  
Legacy ER Project ID
11454  
Legacy ER ID
11454  
Legacy GOLD ID
Gi00332  
NCBI BioProject Name Listeria monocytogenes str. 1/2a F6854
NCBI BioProject ID 10753
NCBI BioProject Accession
PRJNA10753  
NCBI Locus Tag
LMOf  
NCBI Biosample ID SAMN02415268
PI
  
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Animal Pathogen
Cattle Pathogen
Medical
Poultry Pathogen
Swine Pathogen
Sequencing Center J. Craig Venter Institute (USA)
Collaborating Institute
  
Funding Agency USDA (USA)
Project Description
Opportunistic pathogen that causes important food-born disease  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information FDA
Food
GNN_report
Biology
About-Listeria
Entrez
Pathogenesis
Listeriosis
Taxonomy
Publication
Database
  
Genome Publications Nucleic acids research Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Listeria monocytogenes 1/2a F6854
Biosamples Listeria monocytogenes 1/2a F6854
Analysis Projects Listeria monocytogenes 1/2a F6854
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality
  
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology Sanger
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
9.75x  
Vector
  
GC Percent
38  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Listeria monocytogenes 1/2a F6854
Other names (alias, synonyms, short names, common names)
  
Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Listeria  
Genus Synonyms
  
Species
monocytogenes  
Species Synonyms
  
Strain
F6854  
Strain Synonyms
  
Serovar-Biovar
Serotype 1/2a  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 267409
NCBI Kingdom
Bacteria  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Bacillales  
NCBI Family
Listeriaceae  
NCBI Genus
Listeria  
NCBI Species
Listeria monocytogenes  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
30 - 37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
Free living  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Singles
Diseases Food poisoning
Known Habitats Food
Fresh water
Intestinal tract
Soil
Metabolisms
  
Phenotypes Pathogen
Energy Sources Chemoorganotroph
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types