PROJECT NAME
GOLD Project ID
Gp0001533  
Project Name
Lactobacillus reuteri 100-23  
Other Names
Lactobacillus reuteri 100-23  
Legacy ER Project ID
11434  
Legacy ER ID
11434  
Legacy GOLD ID
Gi00762  
NCBI BioProject Name Lactobacillus reuteri 100-23
NCBI BioProject ID 13431
NCBI BioProject Accession
PRJNA13431  
NCBI Locus Tag
Lreu23  
NCBI Biosample ID SAMN00623049
PI Tannock, Gerald
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Biotechnological
Food industry
Sequencing Center DOE Joint Genome Institute (USA)
Collaborating Institute University of Otago (New Zealand)
Funding Agency DOE (USA)
Project Description
Rodent-specific strain  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Wikipedia
Background
Database
  
Genome Publications PLoS genetics 7(2):e1001314 The evolution of host specialization in the vertebrate gut symbiont Lactobacillus reuteri.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Lactobacillus, XX strains
Biosamples Lactobacillus reuteri 100-23
Analysis Projects Lactobacillus reuteri 100-23
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality Level 3: Improved-High-Quality Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology Sanger
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
11x  
Vector
  
GC Percent
39  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Lactobacillus reuteri 100-23
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Lactobacillus  
Genus Synonyms
  
Species
reuteri  
Species Synonyms
  
Strain
100-23  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 349123
NCBI Kingdom
Bacteria  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Lactobacillaceae  
NCBI Genus
Lactobacillus  
NCBI Species
Lactobacillus reuteri  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
Free living  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Birds intestinal microflora
Host
Human intestinal microflora
Mammalian gastrointestinal tract
Metabolisms
  
Phenotypes Non-Pathogen
Probiotic
Energy Sources