PROJECT NAME
GOLD Project ID
Gp0001437  
Project Name
Francisella philomiragia philomiragia ATCC 25015  
Other Names
  
Legacy ER Project ID
11341  
Legacy ER ID
11341  
Legacy GOLD ID
Gi01178  
NCBI BioProject Name Francisella philomiragia subsp. philomiragia ATCC 25015
NCBI BioProject ID 32411
NCBI BioProject Accession
PRJNA32411  
NCBI Locus Tag
FTPG  
NCBI Biosample ID SAMN02595237
PI MCS
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Animal Pathogen
Biothreat
Human Pathogen
Medical
Sequencing Center Broad Institute (USA)
Collaborating Institute
  
Funding Agency NIH-NIAID (USA)
Project Description
Muskrat isolate  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Taxonomy
Entrez
Isolation
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Francisella sequencing project - Broad Institute
Biosamples Francisella philomiragia philomiragia ATCC 25015
Analysis Projects Francisella philomiragia philomiragia ATCC 25015
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality
  
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology
  
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
28.6x  
Vector
  
GC Percent
33  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Francisella philomiragia philomiragia ATCC 25015
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Francisella  
Genus Synonyms
  
Species
philomiragia  
Species Synonyms
  
Strain
ATCC 25015  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 25015  
Type Strain
  
Exemplar DOI
10.1601/ex.3362  
Exemplar Name
Francisella philomiragia  
Taxon DOI
10.1601/tx.2310  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 539329
NCBI Kingdom
Bacteria  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Thiotrichales  
NCBI Family
Francisellaceae  
NCBI Genus
Francisella  
NCBI Species
Francisella philomiragia  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AY928394
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
Free living  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Bacteremia
Pneumonia
Septicemia
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types