PROJECT NAME
GOLD Project ID
Gp0001366  
Project Name
Clostridium butyricum 5521  
Other Names
  
Legacy ER Project ID
11272  
Legacy ER ID
11272  
Legacy GOLD ID
Gi02249  
NCBI BioProject Name Clostridium butyricum 5521
NCBI BioProject ID 20023
NCBI BioProject Accession
PRJNA20023  
NCBI Locus Tag
CBY  
NCBI Biosample ID SAMN02436238
PI
  
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Nucleic Acid
  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Human Pathogen
Medical
Sequencing Center J. Craig Venter Institute (USA)
Collaborating Institute
  
Funding Agency NIH-NIAID (USA)
Project Description
Type E toxin producing species  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Taxonomy
Entrez
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Clostridium butyricum 5521
Biosamples Clostridium butyricum 5521
Analysis Projects Clostridium butyricum 5521
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality
  
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology Sanger
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
8.53x  
Vector
  
GC Percent
29  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Clostridium butyricum 5521
Other names (alias, synonyms, short names, common names)
  
Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Clostridium  
Genus Synonyms
  
Species
butyricum  
Species Synonyms
  
Strain
5521  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 447214
NCBI Kingdom
Bacteria  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Clostridiales  
NCBI Family
Clostridiaceae  
NCBI Genus
Clostridium  
NCBI Species
Clostridium butyricum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Sporulating  
Temperature Range
Mesophile  
Temperature Optimum
37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
Free living  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Pairs
Singles
Diseases Botulism
Known Habitats Food
Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources Chemoorganotroph