PROJECT NAME
GOLD Project ID
Gp0001277  
Project Name
Methylophilales sp. HTCC2181  
Other Names
  
Legacy ER Project ID
11176  
Legacy ER ID
11176  
Legacy GOLD ID
Gi01433  
NCBI BioProject Name Methylophilales bacterium HTCC2181
NCBI BioProject ID 18317
NCBI BioProject Accession
PRJNA18317  
NCBI Locus Tag
MB2181  
NCBI Biosample ID SAMN02436128
PI Stephen Giovannoni
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-09
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Environmental
Marine Microbial Initiative (MMI)
Sequencing Center J. Craig Venter Institute (USA)
Collaborating Institute Oregon State University (USA)
Funding Agency
  
Project Description
Isolate of OM43, a cluster of one of the most abundant beta-Proteobacteria in coastal marine 16S clone libraries.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Information
Publication
Taxonomy
Database
  
Genome Publications Environmental microbiology 10(7):1771-82 The small genome of an abundant coastal ocean methylotroph.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Methylophilales sp. HTCC2181
Biosamples Methylophilales sp. HTCC2181
Analysis Projects Methylophilales sp. HTCC2181
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality Level 3: Improved-High-Quality Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology
  
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
  
Vector
  
GC Percent
38  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Methylophilales sp. HTCC2181
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
  
Genus Synonyms
  
Species
  
Species Synonyms
  
Strain
HTCC2181  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 383631
NCBI Kingdom
Bacteria  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Methylophilales  
NCBI Family
  
NCBI Genus
  
NCBI Species
Methylophilales bacterium HTCC2181  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
Free living  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Fresh water
Fresh water
Marine
Marine
Metabolisms
  
Phenotypes
  
Energy Sources Methylotroph
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types