PROJECT NAME
GOLD Project ID
Gp0001272  
Project Name
gamma proteobacterium sp. HTCC5015  
Other Names
  
Legacy ER Project ID
11172  
Legacy ER ID
11172  
Legacy GOLD ID
Gi01429  
NCBI BioProject Name gamma proteobacterium HTCC5015
NCBI BioProject ID 19309
NCBI BioProject Accession
PRJNA19309  
NCBI Locus Tag
GP5015  
NCBI Biosample ID SAMN02436275
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Environmental
Marine Microbial Initiative (MMI)
Sequencing Center J. Craig Venter Institute (USA)
Collaborating Institute Oregon State University (USA)
Funding Agency Moore Foundation (USA)
Project Description
New deeply rooting lineage of gamma-Proteobacteria.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Information
Taxonomy
Database
  
Genome Publications 20472792
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies gamma proteobacterium sp. HTCC5015
Biosamples gamma proteobacterium sp. HTCC5015
Analysis Projects gamma proteobacterium sp. HTCC5015
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality
  
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology
  
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
  
Vector
  
GC Percent
54  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name gamma proteobacterium sp. HTCC5015
Other names (alias, synonyms, short names, common names)
  
Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
  
Genus Synonyms
  
Species
  
Species Synonyms
  
Strain
HTCC5015  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 391615
NCBI Kingdom
Bacteria  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
  
NCBI Family
  
NCBI Genus
  
NCBI Species
gamma proteobacterium HTCC5015  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
Free living  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Aquatic
Fresh water
Marine
Surface water
Metabolisms
  
Phenotypes
  
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types