PROJECT NAME
GOLD Project ID
Gp0012106  
Project Name
Lactobacillus acidipiscis KCTC 13900  
Other Names
  
Legacy ER Project ID
5316  
Legacy ER ID
5316  
Legacy GOLD ID
Gi10186  
NCBI BioProject Name Lactobacillus acidipiscis KCTC 13900
NCBI BioProject ID 68091
NCBI BioProject Accession
PRJDA68091  
NCBI Locus Tag
GSS  
NCBI Biosample ID
PI Hong-Seog Park
Added By Dinos auto script on 2011-07-14
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Comparative analysis
Sequencing Center KRIBB (South Korea)
Collaborating Institute
  
Funding Agency
  
Project Description
Lactobacillus acidipiscis KCTC 13900 genome sequencing project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 193(18):5053-4 Genome sequence of Lactobacillus cypricasei KCTC 13900.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Lactobacillus acidipiscis KCTC 13900
Biosamples Lactobacillus acidipiscis KCTC 13900
Analysis Projects Lactobacillus acidipiscis KCTC 13900
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality
  
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology 454
Library Method
  
Number Of Reads
  
Read Size
  
Sequencing Depth
24x  
Vector
  
GC Percent
39  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
Organism Name Lactobacillus acidipiscis KCTC 13900
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Lactobacillus  
Genus Synonyms
  
Species
acidipiscis  
Species Synonyms
  
Strain
KCTC 13900  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
KCTC 13900  
Type Strain
  
Exemplar DOI
10.1601/ex.5325  
Exemplar Name
Lactobacillus acidipiscis  
Taxon DOI
10.1601/tx.5325  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1046599
NCBI Kingdom
Bacteria  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Lactobacillaceae  
NCBI Genus
Lactobacillus  
NCBI Species
Lactobacillus acidipiscis  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Food production  
Ecosystem Type
Dairy products  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 305292
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources