PROJECT NAME
GOLD Project ID
Gp0000113  
Project Name
Apis mellifera DH4  
Other Names
  
Legacy ER Project ID
10091  
Legacy ER ID
10091  
Legacy GOLD ID
Gc00594, Gi0010091  
NCBI BioProject Name Apis mellifera DH4
NCBI BioProject ID 10625
NCBI BioProject Accession
PRJNA10625  
NCBI Locus Tag
AMEL  
NCBI Biosample ID SAMN00002455
PI George Weinstock
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Tatiparthi B. Reddy on 2013-02-05
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
DNA  
Nucleic Acid
  
Sequencing Strategy Whole Genome Sequencing
PROJECT INFORMATION
Project Status Permanent Draft
Project Relevance Agricultural
Medical
Sequencing Center
  
Collaborating Institute
  
Funding Agency NIH-NHGRI (USA)
USDA (USA)
Project Description
Apis mellifera genome sequencing project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information GNN_report
Entrez
Beenome
Taxonomy
Wikipedia
Proposal
Database
  
Genome Publications Nature Insights into social insects from the genome of the honeybee Apis mellifera.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Apis mellifera DH4
Biosamples Apis mellifera DH4
Analysis Projects
  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality Level 2: High-Quality Draft
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology Sanger
Library Method
  
Number Of Reads
2700000  
Read Size
  
Sequencing Depth
7.5x  
Vector
  
GC Percent
34  
Chromosome Count
16  
Plasmid Count
0  
ORGANISM NAME
Organism Name Apis mellifera DH4
Other names (alias, synonyms, short names, common names)
  
Domain
EUKARYAL  
Phylogeny
ARTHROPODA  
Genus
Apis  
Genus Synonyms
  
Species
mellifera  
Species Synonyms
  
Strain
DH4  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type Isolate
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 7460
NCBI Kingdom
Eukaryota  
NCBI Phylum
Arthropoda  
NCBI Class
Insecta  
NCBI Order
Hymenoptera  
NCBI Family
Apidae  
NCBI Genus
Apis  
NCBI Species
Apis mellifera  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources