Version 4.0
GOLD CARD: Gi15998
| Organism Information | ||
|---|---|---|
MIGS 2  | DOMAIN | BACTERIAL |
| PHYLUM | FIRMICUTES | |
| MIGS 3 | ORGANISM NAME | Streptococcus agalactiae MRI Z1-025 |
| COMMON NAME | ||
| NCBI PROJECT NAME | Streptococcus agalactiae MRI Z1-025 | |
| GENUS | Streptococcus | |
| GENUS SYNONYM | ||
| SPECIES | agalactiae | |
| SPECIES SYNONYM | ||
| STRAIN | MRI Z1-025 | |
| MIGS 7 | SEROVAR/BIOVAR | |
| MIGS 13 | CULTURE COLLECTION | |
| TYPE STRAIN | No | |
| IMAGE | ||
| Genome Project Information | ||
|---|---|---|
| GOLDSTAMP | Gi15998 | |
| PROJECT TYPE | Whole Genome Sequencing | |
| MIGS 36 | PROJECT STATUS | |
| AVAILABILITY | Public | |
| SEQUENCING CENTERS | J. Craig Venter Institute | |
| FUNDING | ||
| MIGS 38.1 | CONTACT NAME | |
| MIGS 38.2 | CONTACT EMAIL | |
| LOCUS TAG | SAG0143 | |
| COMPLETION DATE | 2012-11-07 | |
| PUBLICATION | ||
| PROJECT RELEVANCE | Comparative analysis, Medical | |
| External Links | ||
|---|---|---|
| NCBI TAXON ID | 1154867 | |
| MIGS 1.1 | NCBI PROJECT ID | 86393 |
| MIGS 1.2 | NCBI ARCHIVE ID | |
| SHORT READS ARCHIVE ID | ||
| GCAT_ID | ||
| HMP ID | ||
| HOMD ID | ||
| STRAININFO ID | ||
| GREENGENES OBJECT ID | ||
| IMG OBJECT ID | ||
| INFORMATION | ||
| GENOME DATA | ANEO00000000 |
|
| MIGS 33 | GENOME DATABASE | |
| Sequencing Information | ||
|---|---|---|
| MIGS 31.1 | SEQUENCING STATUS | Draft |
| SEQUENCING QUALITY | ||
| COMMENTS | ||
| MIGS 28.1 | LIBRARY METHOD | |
| MIGS 28.2 | READS COUNT | |
| MIGS 28.3 | VECTOR | |
| MIGS 30 | ASSEMBLY METHOD | |
| MIGS 31.2 | SEQUENCING DEPTH | 74.62x |
| MIGS 34 | GENE CALLING METHOD | |
| MIGS 31.3 | CONTIG COUNT | 26 |
| MIGS 11 | SIZE(kb) | |
| ORFS | ||
| CHROMOSOME COUNT | ||
| MIGS 10 | PLASMID COUNT | |
| MIGS 35 | GC Content | |
| MIGS 29 | SEQUENCING METHOD | Illumina GAii |
| SEQUENCING COUNTRY | USA | |
| MAP LINK | ||
| Environmental Metadata | ||
|---|---|---|
| MIGS 4.5 | ISOLATION SITE | |
| ISOLATION SOURCE | ||
| ISOLATION COMMENTS | ||
| MIGS 5 | COLLECTION DATE | |
| MIGS 4.6 | ISOLATION COUNTRY | |
| MIGS 12 | ISOLATION PUBMED ID | |
| MIGS 4 | GEOGRAPHIC LOCATION | |
| MIGS 4.1 | LATITUDE | |
| MIGS 4.2 | LONGITUDE | |
| MIGS 4.3 | ALTITUDE | |
| MIGS 4.4 | DEPTH | |
| PROJECT GEOGRAPHICAL MAP | ||
| Host Metadata | ||
|---|---|---|
| MIGS 16 | HOST NAME | bovine |
| HOST TAXON ID | ||
| HOST GENDER | ||
| HOST AGE | ||
| HOST RACE | ||
| MIGS 18 | HOST HEALTH | |
| HOST MEDICATION | ||
| MIGS 17 | HOST SPECIFICITY | |
| BODY SAMPLE SITE | ||
| BODY PRODUCT | ||
| BODY SAMPLE SUBSITE | ||
| HOST COMMENTS | ||
| Organism Metadata | ||
|---|---|---|
| MIGS 22 | OXYGEN REQUIREMENT | Facultative |
| MIGS 37.1 | CELL SHAPE | Coccus-shaped |
| MIGS 37.2 | MOTILITY | Nonmotile |
| MIGS 37.3 | SPORULATION | Nonsporulating |
| MIGS 37.4 | PRESSURE | |
| MIGS 37.12 | TEMPERATURE RANGE | Mesophile |
| SALINITY | ||
| PH | ||
| MIGS 37.5 | CELL DIAMETER | |
| MIGS 37.6 | CELL LENGTH | |
| MIGS 37.7 | COLOR | |
| MIGS 37.8 | GRAM STAINING | |
| MIGS 15 | BIOTIC RELATIONSHIPS | |
| SYMBIOTIC INTERACTION | ||
| SYMBIOTIC RELATIONSHIP | ||
| SYMBIONT NAME | ||
| SYMBIONT TAXON ID | ||
| MIGS 37.9 | CELL ARRANGEMENT | Chains, Pairs |
| DISEASE | Opportunistic infection | |
| MIGS 6 | HABITAT | Host |
| TEMPERATURE | 37 C | |
| MIGS 37.10 | METABOLISM | |
| MIGS 37.11 | PHENOTYPE | Beta-hemolytic, Catalase negative, Opportunistic Pathogen |
| ENERGY SOURCE | Chemoorganotroph | |
- Last update: 2011-09-23
- Total # of genomes: 11473
