 |
GOLD CARD Gc01156 | |
Streptosporangium roseum NI 9100, DSM 43021 | 
|
| ORGANISM INFORMATION | ||
|---|---|---|
MIGS 2  | DOMAIN | BACTERIAL |
| MIGS 3 | ORGANISM NAME | Streptosporangium roseum NI 9100, DSM 43021 |
| NCBI PROJECT NAME | Streptosporangium roseum DSM 43021 | |
| GENUS | Streptosporangium | |
| SPECIES | roseum | |
| STRAIN | NI 9100, DSM 43021 | |
| MIGS 13 | CULTURE COLLECTION | DSM 43021 ATCC 12428 CBS 313.56 IAM 14294 IFO 3776 JCM 3005 |
| TYPE STRAIN | Yes | |
| GENOME PROJECT INFORMATION | ||
|---|---|---|
| GOLDSTAMP | Gc01156 | |
| AVAILABILITY | Public | |
| SEQUENCING CENTERS | DOE Joint Genome Institute | |
| FUNDING | DOE DSMZ | |
| MIGS 38.1 | CONTACT NAME | Bruce D |
| MIGS 38.2 | CONTACT EMAIL | microbes@cuba.jgi-psf.org |
| COMPLETION DATE | 2009-12-10 | |
| PUBLICATION | SIGS | |
| PROJECT RELEVANCE | Tree of Life, GEBA | |
| EXTERNAL LINKS | ||
|---|---|---|
| NCBI TAXON ID | 479432 | |
| MIGS 1.1 | NCBI PROJECT ID | 21083 |
| GCAT_ID | 002929_GCAT | |
| STRAININFO ID | 319299 | |
| IMG OBJECT ID | 646311958 | |
| GENOME DATA | NC_013595 |
|
| MIGS 33 | GENOME DATABASE | NCBI IMG-GEBA DOE Joint Genome Institute |
| SEQUENCING INFORMATION | ||
|---|---|---|
| MIGS 31.1 | SEQUENCING STATUS | Complete |
| SEQUENCING QUALITY | Level 6: Finished | |
| MIGS 28.1 | LIBRARY METHOD | 6Kb, 454 |
| MIGS 28.2 | READS COUNT | 128042 Sanger, 1033578 454 |
| MIGS 28.3 | VECTOR | pMCL200, pcc1Fos, 454 |
| MIGS 30 | ASSEMBLY METHOD | Newbler 1.1.02.15, phrap |
| MIGS 31.2 | SEQUENCING DEPTH | 45x Sanger, 27.6x pyrosequence |
| MIGS 34 | GENE CALLING METHOD | Prodigal, GenePRIMP |
| MIGS 11 | SIZE(kb) | 10396 |
| ORFS | 9501 | |
| MIGS 9 | CHROMOSOME COUNT | 1 |
| MIGS 10 | PLASMID COUNT | 1 |
| MIGS 35 | GC Content | 70.8 % |
| MIGS 29 | SEQUENCING METHOD | Sanger, 454-FLX |
| SEQUENCING COUNTRY | USA | |
| ENVIRONMENTAL METADATA | ||
|---|---|---|
| MIGS 4.5 | ISOLATION SITE | Vegetable garden soil |
| MIGS 5 | COLLECTION DATE | 1955 or before |
| MIGS 4.6 | ISOLATION COUNTRY | USA |
| MIGS 4 | GEOGRAPHIC LOCATION | Vegetable garden soil |
| MIGS 4.1 | LATITUDE | 35.91 |
| MIGS 4.2 | LONGITUDE | -79.055 |
| PROJECT GEOGRAPHICAL MAP | ||
| HOST METADATA |
|---|
| ORGANISM METADATA | ||
|---|---|---|
| MIGS 22 | OXYGEN REQUIREMENT | Aerobe |
| MIGS 37.1 | CELL SHAPE | Filament-shaped |
| MIGS 37.2 | MOTILITY | Nonmotile |
| MIGS 37.3 | SPORULATION | Sporulating |
| MIGS 37.12 | TEMPERATURE RANGE | Mesophile |
| MIGS 15 | BIOTIC REALTIONSHIPS | Free living |
| DISEASE | None | |
| HABITAT | Soil | |
| TEMPERATURE | 28 | |