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GOLD CARD Gc01024 | |
Actinosynnema mirum 101, DSM 43827 | 
|
| ORGANISM INFORMATION | ||
|---|---|---|
MIGS 2  | DOMAIN | BACTERIAL |
| MIGS 3 | ORGANISM NAME | Actinosynnema mirum 101, DSM 43827 |
| NCBI PROJECT NAME | Actinosynnema mirum DSM 43827 | |
| GENUS | Actinosynnema | |
| SPECIES | mirum | |
| STRAIN | 101, DSM 43827 | |
| MIGS 13 | CULTURE COLLECTION | DSM 43827 ATCC 29888 NBRC 14064 |
| TYPE STRAIN | Yes | |
| GENOME PROJECT INFORMATION | ||
|---|---|---|
| GOLDSTAMP | Gc01024 | |
| AVAILABILITY | Public | |
| SEQUENCING CENTERS | DOE Joint Genome Institute | |
| FUNDING | DSMZ DOE | |
| MIGS 38.1 | CONTACT NAME | Bruce D |
| MIGS 38.2 | CONTACT EMAIL | microbes@cuba.jgi-psf.org |
| COMPLETION DATE | 2009-06-09 | |
| PUBLICATION | SIGS | |
| PROJECT RELEVANCE | Tree of Life, GEBA, Biotechnological, Antibiotic production | |
| EXTERNAL LINKS | ||
|---|---|---|
| NCBI TAXON ID | 446462 | |
| MIGS 1.1 | NCBI PROJECT ID | 19705 |
| GCAT_ID | 002712_GCAT | |
| STRAININFO ID | 267378 | |
| IMG OBJECT ID | 644736323 | |
| GENOME DATA | NZ_ABTA |
|
| MIGS 33 | GENOME DATABASE | DOE Joint Genome Institute IMG-GEBA NCBI |
| SEQUENCING INFORMATION | ||
|---|---|---|
| MIGS 31.1 | SEQUENCING STATUS | Complete |
| SEQUENCING QUALITY | Level 6: Finished | |
| MIGS 28.1 | LIBRARY METHOD | 8Kb, fosmid |
| MIGS 28.3 | VECTOR | pMCL200, pcc1Fos |
| MIGS 30 | ASSEMBLY METHOD | Newbler version 1.1.02.15, Phrap |
| MIGS 31.2 | SEQUENCING DEPTH | 8.9x Sanger; 20x pyrosequence |
| MIGS 34 | GENE CALLING METHOD | Prodigal |
| MIGS 11 | SIZE(kb) | 8248 |
| ORFS | 7177 | |
| MIGS 9 | CHROMOSOME COUNT | 1 |
| MIGS 35 | GC Content | 73.7 % |
| MIGS 29 | SEQUENCING METHOD | 454-FLX, Illumina, Sanger |
| SEQUENCING COUNTRY | USA | |
| MAP LINK | MAP | |
| ENVIRONMENTAL METADATA | ||
|---|---|---|
| MIGS 4.5 | ISOLATION SITE | "Blade of grass from Raritan River NJ, USA" |
| MIGS 5 | COLLECTION DATE | September 1976 |
| MIGS 4.6 | ISOLATION COUNTRY | USA |
| MIGS 4 | GEOGRAPHIC LOCATION | NJ USA |
| MIGS 4.1 | LATITUDE | 40.491816 |
| MIGS 4.2 | LONGITUDE | -74.322087 |
| PROJECT GEOGRAPHICAL MAP | ||
| HOST METADATA |
|---|
| ORGANISM METADATA | ||
|---|---|---|
| MIGS 22 | OXYGEN REQUIREMENT | Aerobe |
| MIGS 37.2 | MOTILITY | Nonmotile |
| MIGS 37.3 | SPORULATION | Sporulating |
| MIGS 37.12 | TEMPERATURE RANGE | Mesophile |
| MIGS 15 | BIOTIC REALTIONSHIPS | Free living |
| DISEASE | None | |
| HABITAT | Soil | |
| TEMPERATURE | 10-30 | |
| MIGS 37.10 | METABOLISM | Nocardicin A producer |
| ENERGY SOURCE | Chemoorganotroph | |